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Benjamin Stich

Prof. Dr.
Heinrich-Heine-University Duesseldorf
Biology
Universitätsstraße 1, 40591 Düsseldorf, Germany
Düsseldorf 40591
+49 211 8113396
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Smith EN, van Aalst M, Tosens T, Niinemets ?, Stich B, Morosinotto T, Alboresi A, Erb TJ, G?mez-Coronado PA, Tolleter D, Finazzi G, Curien G, Heinemann M, Ebenh?h O, Hibberd JM, Schl?ter U, Sun T, Weber APM. Improving photosynthetic efficiency toward food security: Strategies, advances, and perspectives. Mol Plant. 2023 Oct 02; 16(10):1547-1563. PMID: 37660255.
      Citations: 1     Fields:    Translation:AnimalsCells
    2. Arlt C, Wachtmeister T, K?hrer K, Stich B. Affordable, accurate and unbiased RNA sequencing by manual library miniaturization: A case study in barley. Plant Biotechnol J. 2023 Aug 18. PMID: 37593840.
      Citations:    Fields:    Translation:Animals
    3. Guerreiro R, Bonthala VS, Schl?ter U, Hoang NV, Triesch S, Schranz ME, Weber APM, Stich B. A genomic panel for studying C3-C4 intermediate photosynthesis in the Brassiceae tribe. Plant Cell Environ. 2023 Nov; 46(11):3611-3627. PMID: 37431820.
      Citations: 2     Fields:    Translation:AnimalsCells
    4. Schl?ter U, Bouvier JW, Guerreiro R, Malisic M, Kontny C, Westhoff P, Stich B, Weber APM. Brassicaceae display variation in efficiency of photorespiratory carbon recapturing mechanisms. J Exp Bot. 2023 Jul 01. PMID: 37392176.
      Citations: 2     Fields:    Translation:AnimalsCells
    5. Wu PY, Stich B, Renner J, Muders K, Prigge V, van Inghelandt D. Optimal implementation of genomic selection in clone breeding programs-Exemplified in potato: I. Effect of selection strategy, implementation stage, and selection intensity on short-term genetic gain. Plant Genome. 2023 06; 16(2):e20327. PMID: 37177848.
      Citations: 1     Fields:    Translation:Animals
    6. Schneider M, Siddiqui MN, Pandey K, Bhadhury SK, Sadeqi B, Sanchez-Garcia M, Stich B, Schaaf G, L?on J, Ballvora A. Convergently selected NPF2.12 coordinates root growth and nitrogen use efficiency in wheat and barley. New Phytol. 2023 06; 238(5):2175-2193. PMID: 36808608.
      Citations: 2     Fields:    Translation:Animals
    7. Weisweiler M, Stich B. Benchmarking of structural variant detection in the tetraploid potato genome using linked-read sequencing. Genomics. 2023 03; 115(2):110568. PMID: 36702293.
      Citations:    Fields:    Translation:Animals
    8. Shrestha A, Cosenza F, van Inghelandt D, Wu PY, Li J, Casale FA, Weisweiler M, Stich B. The double round-robin population unravels the genetic architecture of grain size in barley. J Exp Bot. 2022 Dec 08; 73(22):7344-7361. PMID: 36094852.
      Citations: 1     Fields:    
    9. Weisweiler M, Arlt C, Wu PY, Van Inghelandt D, Hartwig T, Stich B. Structural variants in the barley gene pool: precision and sensitivity to detect them using short-read sequencing and their association with gene expression and phenotypic variation. Theor Appl Genet. 2022 Oct; 135(10):3511-3529. PMID: 36029318; PMCID: PMC9519679.
      Citations:    Fields:    Translation:Animals
    10. Schneider M, Casale F, Stich B. Accurate recombination estimation from pooled genotyping and sequencing: a case study on barley. BMC Genomics. 2022 Jun 25; 23(1):468. PMID: 35752769; PMCID: PMC9233355.
      Citations:    Fields:    Translation:Animals
    11. Wei J, Fang Y, Jiang H, Wu XT, Zuo JH, Xia XC, Cao H, Liu YX, Li JQ, Stich B. Combining QTL mapping and gene co-expression network analysis for prediction of candidate genes and molecular network related to yield in wheat. BMC Plant Biol. 2022 Jun 13; 22(1):288. PMID: 35698038; PMCID: PMC9190149.
      Citations: 4     Fields:    Translation:AnimalsCells
    12. Bonthala VS, Stich B. Genetic Divergence of Lineage-Specific Tandemly Duplicated Gene Clusters in Four Diploid Potato Genotypes. Front Plant Sci. 2022; 13:875202. PMID: 35645998; PMCID: PMC9131075.
      Citations: 3     
    13. Erban A, Wu PY, Stich B, Weisweiler M, Shrestha A, Westhoff P, Inghelandt DV. Improvement of prediction ability by integrating multi-omic datasets in barley. BMC Genomics. 2022 Mar 12; 23(1):200. PMID: 35279073; PMCID: PMC8917753.
      Citations: 3     Fields:    Translation:Animals
    14. Casale F, Van Inghelandt D, Weisweiler M, Li J, Stich B. Genomic prediction of the recombination rate variation in barley - A route to highly recombinogenic genotypes. Plant Biotechnol J. 2022 04; 20(4):676-690. PMID: 34783155; PMCID: PMC8989500.
      Citations: 8     Fields:    Translation:Animals
    15. Muders K, Truberg B, Rosen A, Prigge V, Freire R, Weisweiler M, Guerreiro R, Baig N, H?ttel B, Obeng-Hinneh E, Renner J, Hartje S, Bruckm?ller J, L?beck J, Stich B. Chromosome-scale reference genome assembly of a diploid potato clone derived from an elite variety. G3 (Bethesda). 2021 12 08; 11(12). PMID: 34534288; PMCID: PMC8664475.
      Citations: 6     Fields:    Translation:AnimalsCells
    16. K?hl MA, Stich B, Ries DC. Mutation-Simulator: fine-grained simulation of random mutations in any genome. Bioinformatics. 2021 05 01; 37(4):568-569. PMID: 32780803; PMCID: PMC8088320.
      Citations: 12     Fields:    
    17. Shi R, Stich B, Benke A, Schmidt M, Urbany C, von Wir?n N. The maize shoot ionome: Its interaction partners, predictive power, and genetic determinants. Plant Cell Environ. 2020 09; 43(9):2095-2111. PMID: 32529648.
      Citations: 5     Fields:    Translation:Animals
    18. Longin F, Rapp M, Philipp N, Erban A, Beck H, G?tler H, Heilig W, Kleinert M, Brilhaus D, Mettler-Altmann T, Stich B. Aroma and quality of breads baked from old and modern wheat varieties and their prediction from genomic and flour-based metabolite profiles. Food Res Int. 2020 03; 129:108748. PMID: 32036907.
      Citations: 7     Fields:    Translation:HumansAnimalsPHPublic Health
    19. Weisweiler M, Montaigu A, Ries D, Pfeifer M, Stich B. Transcriptomic and presence/absence variation in the barley genome assessed from multi-tissue mRNA sequencing and their power to predict phenotypic traits. BMC Genomics. 2019 Oct 29; 20(1):787. PMID: 31664921; PMCID: PMC6819542.
      Citations: 9     Fields:    Translation:AnimalsCells
    20. Inghelandt DV, Frey FP, Ries D, Stich B. QTL mapping and genome-wide prediction of heat tolerance in multiple connected populations of temperate maize. Sci Rep. 2019 10 08; 9(1):14418. PMID: 31594984; PMCID: PMC6783442.
      Citations: 13     Fields:    Translation:Animals
    21. Shi R, Melzer M, Zheng S, Benke A, Stich B, von Wir?n N. Iron Retention in Root Hemicelluloses Causes Genotypic Variability in the Tolerance to Iron Deficiency-Induced Chlorosis in Maize. Front Plant Sci. 2018; 9:557. PMID: 29755495; PMCID: PMC5932200.
      Citations: 7     
    22. Stich B, Van Inghelandt D. Prospects and Potential Uses of Genomic Prediction of Key Performance Traits in Tetraploid Potato. Front Plant Sci. 2018; 9:159. PMID: 29563919; PMCID: PMC5845909.
      Citations: 16     
    23. Clarke WE, Higgins EE, Plieske J, Wieseke R, Sidebottom C, Khedikar Y, Batley J, Edwards D, Meng J, Li R, Lawley CT, Laga B, Cheung W, Iniguez-Luy F, Dyrszka E, Rae S, Snowdon RJ, Sharpe AG, Ganal MW, Parkin IA, Pauquet J, Stich B. A high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genome. Theor Appl Genet. 2016 Oct; 129(10):1887-99. PMID: 27364915; PMCID: PMC5025514.
      Citations: 95     Fields:    Translation:Animals
    24. Bus A, Li J, Parkin IA, Wittkop B, Snowdon RJ, Stich B, K?rber N. Agronomic and Seed Quality Traits Dissected by Genome-Wide Association Mapping in Brassica napus. Front Plant Sci. 2016; 7:386. PMID: 27066036; PMCID: PMC4814720.
      Citations: 34     
    25. Presterl T, Lecoq P, Frey FP, Orlik A, Stich B. First steps to understand heat tolerance of temperate maize at adult stage: identification of QTL across multiple environments with connected segregating populations. Theor Appl Genet. 2016 May; 129(5):945-61. PMID: 26886101; PMCID: PMC4835532.
      Citations: 18     Fields:    Translation:Animals
    26. Spamer V, Li J, Bus A, Stich B. Comparison of statistical models for nested association mapping in rapeseed (Brassica napus L.) through computer simulations. BMC Plant Biol. 2016 Jan 25; 16:26. PMID: 26810901; PMCID: PMC4727311.
      Citations: 4     Fields:    Translation:AnimalsCells
    27. Higgins J, Bancroft I, Higgins EE, Parkin IA, Salazar-Colqui B, Snowdon RJ, K?rber N, Bus A, Li J, Stich B. Seedling development traits in Brassica napus examined by gene expression analysis and association mapping. BMC Plant Biol. 2015 Jun 09; 15:136. PMID: 26055390; PMCID: PMC4459455.
      Citations: 10     Fields:    Translation:Animals
    28. Frey FP, Urbany C, H?ttel B, Reinhardt R, Stich B. Genome-wide expression profiling and phenotypic evaluation of European maize inbreds at seedling stage in response to heat stress. BMC Genomics. 2015 Feb 25; 16:123. PMID: 25766122; PMCID: PMC4347969.
      Citations: 46     Fields:    Translation:Animals
    29. Horn F, Habekuss A, Stich B. Linkage mapping of Barley yellow dwarf virus resistance in connected populations of maize. BMC Plant Biol. 2015 Feb 03; 15:29. PMID: 25643896; PMCID: PMC4329211.
      Citations: 5     Fields:    Translation:AnimalsCells
    30. Benke A, Urbany C, Stich B. Genome-wide association mapping of iron homeostasis in the maize association population. BMC Genet. 2015 Jan 30; 16:1. PMID: 25634232; PMCID: PMC4342226.
      Citations: 7     Fields:    Translation:Animals
    31. Bus A, Parkin IA, Samans B, Snowdon RJ, Li J, Stich B, K?rber N. Species- and genome-wide dissection of the shoot ionome in Brassica napus and its relationship to seedling development. Front Plant Sci. 2014; 5:485. PMID: 25324847; PMCID: PMC4179769.
      Citations: 12     
    32. Stich B, Horn F, Habeku? A. Genes involved in barley yellow dwarf virus resistance of maize. Theor Appl Genet. 2014 Dec; 127(12):2575-84. PMID: 25261982; PMCID: PMC4236618.
      Citations: 4     Fields:    Translation:AnimalsCells
    33. Benke A, Urbany C, Marsian J, Shi R, Wir?n Nv, Stich B. The genetic basis of natural variation for iron homeostasis in the maize IBM population. BMC Plant Biol. 2014 Jan 09; 14:12. PMID: 24400634; PMCID: PMC3890576.
      Citations: 8     Fields:    Translation:Animals
    34. Urbany C, Benke A, Marsian J, Huettel B, Reinhardt R, Stich B. Ups and downs of a transcriptional landscape shape iron deficiency associated chlorosis of the maize inbreds B73 and Mo17. BMC Plant Biol. 2013 Dec 13; 13:213. PMID: 24330725; PMCID: PMC3881016.
      Citations: 6     Fields:    Translation:AnimalsCells
    35. Debieu M, Tang C, Stich B, Sikosek T, Effgen S, Josephs E, Schmitt J, Nordborg M, Koornneef M, de Meaux J. Co-variation between seed dormancy, growth rate and flowering time changes with latitude in Arabidopsis thaliana. PLoS One. 2013; 8(5):e61075. PMID: 23717385; PMCID: PMC3662791.
      Citations: 54     Fields:    Translation:Animals
    36. Stich B, Piepho HP, M?ller BU. Response to 'controlling type 1 error rates in genome-wide association studies in plants' by Andrew W George. Heredity (Edinb). 2013 Jul; 111(1):88. PMID: 23321704; PMCID: PMC3692310.
      Citations: 1     Fields:    Translation:Animals
    37. Wittkop B, Bus A, Friedt W, Snowdon RJ, Stich B, K?rber N. Seedling development in a Brassica napus diversity set and its relationship to agronomic performance. Theor Appl Genet. 2012 Oct; 125(6):1275-87. PMID: 22782254.
      Citations: 17     Fields:    Translation:Animals
    38. Fritsche S, Wang X, Li J, Stich B, Kopisch-Obuch FJ, Endrigkeit J, Leckband G, Dreyer F, Friedt W, Meng J, Jung C. A candidate gene-based association study of tocopherol content and composition in rapeseed (Brassica napus). Front Plant Sci. 2012; 3:129. PMID: 22740840; PMCID: PMC3382996.
      Citations: 28     
    39. Bus A, Hecht J, Huettel B, Reinhardt R, Stich B. High-throughput polymorphism detection and genotyping in Brassica napus using next-generation RAD sequencing. BMC Genomics. 2012 Jun 24; 13:281. PMID: 22726880; PMCID: PMC3442993.
      Citations: 65     Fields:    Translation:Animals
    40. Durek P, Nunes-Nesi A, Stich B, Fernie AR, Gebhardt C, Draffehn AM. Tapping natural variation at functional level reveals allele specific molecular characteristics of potato invertase Pain-1. Plant Cell Environ. 2012 Dec; 35(12):2143-54. PMID: 22621197.
      Citations: 5     Fields:    Translation:AnimalsCells
    41. Van Inghelandt D, Melchinger AE, Martinant JP, Stich B. Genome-wide association mapping of flowering time and northern corn leaf blight (Setosphaeria turcica) resistance in a vast commercial maize germplasm set. BMC Plant Biol. 2012 Apr 30; 12:56. PMID: 22545925; PMCID: PMC3511189.
      Citations: 25     Fields:    Translation:Animals
    42. Bhosale SU, Stich B, Rattunde HF, Weltzien E, Haussmann BI, Hash CT, Ramu P, Cuevas HE, Paterson AH, Melchinger AE, Parzies HK. Association analysis of photoperiodic flowering time genes in west and central African sorghum [Sorghum bicolor (L.) Moench]. BMC Plant Biol. 2012 Mar 07; 12:32. PMID: 22394582; PMCID: PMC3364917.
      Citations: 9     Fields:    Translation:AnimalsCells
    43. Klasen JR, Piepho HP, Stich B. QTL detection power of multi-parental RIL populations in Arabidopsis thaliana. Heredity (Edinb). 2012 Jun; 108(6):626-32. PMID: 22334115; PMCID: PMC3356812.
      Citations: 14     Fields:    Translation:Animals
    44. Urbany C, Colby T, Stich B, Schmidt L, Gebhardt C, Schmidt J. Analysis of natural variation of the potato tuber proteome reveals novel candidate genes for tuber bruising. J Proteome Res. 2012 Feb 03; 11(2):703-16. PMID: 22047174.
      Citations: 7     Fields:    Translation:Animals
    45. Weissleder K, Stich B, Li J, L?hmann AK. Genome-wide distribution of genetic diversity and linkage disequilibrium in elite sugar beet germplasm. BMC Genomics. 2011 Oct 04; 12:484. PMID: 21970685; PMCID: PMC3213064.
      Citations: 8     Fields:    Translation:Animals
    46. Snowdon RJ, Stich B, Bus A, K?rber N. Patterns of molecular variation in a species-wide germplasm set of Brassica napus. Theor Appl Genet. 2011 Dec; 123(8):1413-23. PMID: 21847624.
      Citations: 69     Fields:    Translation:AnimalsCells
    47. Benke A, Stich B. An analysis of selection on candidate genes for regulation, mobilization, uptake, and transport of iron in maize. Genome. 2011 Aug; 54(8):674-83. PMID: 21848414.
      Citations: 5     Fields:    Translation:Animals
    48. Gebhardt C, Stich B. Detection of epistatic interactions in association mapping populations: an example from tetraploid potato. Heredity (Edinb). 2011 Dec; 107(6):537-47. PMID: 21673745; PMCID: PMC3242626.
      Citations: 5     Fields:    Translation:Animals
    49. Bhosale SU, Stich B, Rattunde HF, Weltzien E, Haussmann BI, Hash CT, Melchinger AE, Parzies HK. Population structure in sorghum accessions from West Africa differing in race and maturity class. Genetica. 2011 Apr; 139(4):453-63. PMID: 21455788.
      Citations: 4     Fields:    Translation:AnimalsCells
    50. Urbany C, Stich B, Schmidt L, Simon L, Berding H, Junghans H, Niehoff KH, Braun A, Tacke E, Hofferbert HR, Strahwald J, Gebhardt C, L?beck J. Association genetics in Solanum tuberosum provides new insights into potato tuber bruising and enzymatic tissue discoloration. BMC Genomics. 2011 Jan 05; 12:7. PMID: 21208436; PMCID: PMC3023753.
      Citations: 21     Fields:    Translation:Animals
    51. Stich B, Piepho HP, M?ller BU. A general method for controlling the genome-wide type I error rate in linkage and association mapping experiments in plants. Heredity (Edinb). 2011 May; 106(5):825-31. PMID: 20959861; PMCID: PMC3186238.
      Citations: 17     Fields:    Translation:Animals
    52. Haussmann BI, Pasam R, Bhosale S, Hash CT, Melchinger AE, Parzies HK, Stich B. Patterns of molecular and phenotypic diversity in pearl millet [Pennisetum glaucum (L.) R. Br.] from West and Central Africa and their relation to geographical and environmental parameters. BMC Plant Biol. 2010 Oct 06; 10:216. PMID: 20925912; PMCID: PMC3017833.
      Citations: 14     Fields:    Translation:AnimalsCells
    53. Stich B, Gebhardt C, Odeny DA. Physical organization of mixed protease inhibitor gene clusters, coordinated expression and association with resistance to late blight at the StKI locus on potato chromosome III. Plant Cell Environ. 2010 Dec; 33(12):2149-61. PMID: 20716067.
      Citations: 12     Fields:    Translation:AnimalsCells
    54. Prinzenberg AE, Barbier H, Salt DE, Stich B, Reymond M. Relationships between growth, growth response to nutrient supply, and ion content using a recombinant inbred line population in Arabidopsis. Plant Physiol. 2010 Nov; 154(3):1361-71. PMID: 20826703; PMCID: PMC2971612.
      Citations: 19     Fields:    Translation:Animals
    55. El-Lithy ME, Reymond M, Stich B, Koornneef M, Vreugdenhil D. Relation among plant growth, carbohydrates and flowering time in the Arabidopsis Landsberg erecta x Kondara recombinant inbred line population. Plant Cell Environ. 2010 Aug 01; 33(8):1369-82. PMID: 20374533.
      Citations: 22     Fields:    Translation:Animals
    56. Van Inghelandt D, Melchinger AE, Lebreton C, Stich B. Population structure and genetic diversity in a commercial maize breeding program assessed with SSR and SNP markers. Theor Appl Genet. 2010 May; 120(7):1289-99. PMID: 20063144; PMCID: PMC2854351.
      Citations: 93     Fields:    Translation:AnimalsCells
    57. Utz HF, Piepho HP, Maurer HP, Melchinger AE, Stich B. Optimum allocation of resources for QTL detection using a nested association mapping strategy in maize. Theor Appl Genet. 2010 Feb; 120(3):553-61. PMID: 19847390; PMCID: PMC2807940.
      Citations: 6     Fields:    Translation:Animals
    58. Stich B. Comparison of mating designs for establishing nested association mapping populations in maize and Arabidopsis thaliana. Genetics. 2009 Dec; 183(4):1525-34. PMID: 19805816; PMCID: PMC2787436.
      Citations: 18     Fields:    Translation:Animals
    59. Stich B, Melchinger AE. Comparison of mixed-model approaches for association mapping in rapeseed, potato, sugar beet, maize, and Arabidopsis. BMC Genomics. 2009 Feb 27; 10:94. PMID: 19250529; PMCID: PMC2676307.
      Citations: 36     Fields:    Translation:AnimalsCells
    60. Pajerowska-Mukhtar K, Stich B, Achenbach U, Ballvora A, Strahwald J, Tacke E, Hofferbert HR, Ilarionova E, Bellin D, Walkemeier B, Basekow R, Kersten B, Gebhardt C, L?beck J. Single nucleotide polymorphisms in the allene oxide synthase 2 gene are associated with field resistance to late blight in populations of tetraploid potato cultivars. Genetics. 2009 Mar; 181(3):1115-27. PMID: 19139145; PMCID: PMC2651047.
      Citations: 31     Fields:    Translation:Animals
    61. Stich B, Melchinger AE, Heckenberger M, Schechert A, Piepho HP, M?hring J. Association mapping in multiple segregating populations of sugar beet (Beta vulgaris L.). Theor Appl Genet. 2008 Nov; 117(7):1167-79. PMID: 18719879.
      Citations: 15     Fields:    Translation:AnimalsCells
    62. Stich B, Piepho HP, Schulz B, Melchinger AE. Multi-trait association mapping in sugar beet (Beta vulgaris L.). Theor Appl Genet. 2008 Oct; 117(6):947-54. PMID: 18651127.
      Citations: 24     Fields:    Translation:AnimalsCells
    63. Stich B, Piepho HP, Heckenberger M, Buckler ES, Melchinger AE, M?hring J. Comparison of mixed-model approaches for association mapping. Genetics. 2008 Mar; 178(3):1745-54. PMID: 18245847; PMCID: PMC2278052.
      Citations: 119     Fields:    Translation:Animals
    64. Stich B, Melchinger AE, Piepho HP, Hamrit S, Schipprack W, Maurer HP, Reif JC. Potential causes of linkage disequilibrium in a European maize breeding program investigated with computer simulations. Theor Appl Genet. 2007 Aug; 115(4):529-36. PMID: 17598084.
      Citations: 10     Fields:    Translation:AnimalsCells
    65. Stich B, Yu J, Melchinger AE, Piepho HP, Utz HF, Maurer HP, Buckler ES. Power to detect higher-order epistatic interactions in a metabolic pathway using a new mapping strategy. Genetics. 2007 May; 176(1):563-70. PMID: 17194777; PMCID: PMC1893018.
      Citations: 23     Fields:    Translation:Animals
    66. Stich B, Melchinger AE, Piepho HP, Heckenberger M, Maurer HP, Reif JC. A new test for family-based association mapping with inbred lines from plant breeding programs. Theor Appl Genet. 2006 Oct; 113(6):1121-30. PMID: 16896707.
      Citations: 7     Fields:    Translation:Animals
    67. Stich B, Melchinger AE, Frisch M, Maurer HP, Heckenberger M, Reif JC. Linkage disequilibrium in European elite maize germplasm investigated with SSRs. Theor Appl Genet. 2005 Aug; 111(4):723-30. PMID: 15997389.
      Citations: 79     Fields:    Translation:AnimalsCells

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