Next Generation Sequencing Competence Network

Next Generation Sequencing Competence Network

e.g. CCGA
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Bruno Huettel

Dr.
Max Planck Institute for Plant Breeding Research
Genome Centre
Carl-von-Linne-Weg 10, 50829 Köln, Germany
Köln 50829
+49 221 5062828
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Mata-Sucre Y, Matzenauer W, Castro N, Huettel B, Pedrosa-Harand A, Marques A, Souza G. Repeat-based phylogenomics shed light on unclear relationships in the monocentric genus Juncus L. (Juncaceae). Mol Phylogenet Evol. 2023 Sep 16; 189:107930. PMID: 37717642.
      Citations: 1     Fields:    Translation:Cells
    2. Ingham CS, Engl T, Matarrita-Carranza B, Vogler P, Huettel B, Wielsch N, Svato? A, Kaltenpoth M. Host hydrocarbons protect symbiont transmission from a radical host defense. Proc Natl Acad Sci U S A. 2023 08; 120(31):e2302721120. PMID: 37487102; PMCID: PMC10400980.
      Citations: 2     Fields:    Translation:Animals
    3. Baumgarten L, Pieper B, Song B, Mane S, Lempe J, Lamb J, Cooke EL, Srivastava R, Str?tt S, ?anko D, Casimiro PG, Hallab A, Cartolano M, Tattersall AD, Huettel B, Filatov DA, Pavlidis P, Neuffer B, Bazakos C, Schaefer H, Mott R, Gan X, Alonso-Blanco C, Laurent S, Tsiantis M. Pan-European study of genotypes and phenotypes in the Arabidopsis relative Cardamine hirsuta reveals how adaptation, demography, and development shape diversity patterns. PLoS Biol. 2023 07; 21(7):e3002191. PMID: 37463141; PMCID: PMC10353826.
      Citations: 1     Fields:    Translation:Animals
    4. Skeffington A, Fischer A, Sviben S, Brzezinka M, G?rka M, Bertinetti L, Woehle C, Huettel B, Graf A, Scheffel A. A joint proteomic and genomic investigation provides insights into the mechanism of calcification in coccolithophores. Nat Commun. 2023 Jun 23; 14(1):3749. PMID: 37353496; PMCID: PMC10290126.
      Citations:    Fields:    Translation:Animals
    5. Kuo YT, C?mara AS, Schubert V, Neumann P, Macas J, Melzer M, Chen J, Fuchs J, Abel S, Klocke E, Huettel B, Himmelbach A, Demidov D, Dunemann F, Mascher M, Ishii T, Marques A, Houben A. Holocentromeres can consist of merely a few megabase-sized satellite arrays. Nat Commun. 2023 06 13; 14(1):3502. PMID: 37311740; PMCID: PMC10264360.
      Citations: 2     Fields:    Translation:Cells
    6. Sarnowska E, Kubala S, Cwiek P, Sacharowski S, Oksinska P, Steciuk J, Zaborowska M, Szurmak JM, Dubianski R, Maassen A, Stachowiak M, Huettel B, Ciesla M, Nowicka K, Rolicka AT, Bucior E, Skoneczna A, Hajirezaei MR, Siedlecki JA, Sarnowski TJ, Alseekh S, Franzen R, Domagalska MA, Amar S, Fernie AR, Davis SJ. A non-canonical function of Arabidopsis ERECTA proteins and a role of the SWI3B subunit of the SWI/SNF chromatin remodeling complex in gibberellin signaling. Plant J. 2023 08; 115(3):788-802. PMID: 37114596.
      Citations:    Fields:    Translation:HumansAnimalsCells
    7. Hartwig T, Banf M, Prietsch GP, Zhu JY, Mora-Ram?rez I, Schippers JHM, Snodgrass SJ, Seetharam AS, Huettel B, Kolkman JM, Yang J, Engelhorn J, Wang ZY. Hybrid allele-specific ChIP-seq analysis identifies variation in brassinosteroid-responsive transcription factor binding linked to traits in maize. Genome Biol. 2023 05 08; 24(1):108. PMID: 37158941; PMCID: PMC10165856.
      Citations:    Fields:    Translation:Animals
    8. Frommer B, M?llner S, Holtgr?we D, Vieh?ver P, Huettel B, T?pfer R, Weisshaar B, Zyprian E. Phased grapevine genome sequence of an Rpv12 carrier for biotechnological exploration of resistance to Plasmopara viticola. Front Plant Sci. 2023; 14:1180982. PMID: 37223784; PMCID: PMC10200900.
      Citations: 1     
    9. Sidhu C, Kirstein IV, Meunier CL, Rick J, Fofonova V, Wiltshire KH, Steinke N, Vidal-Melgosa S, Hehemann JH, Huettel B, Schweder T, Fuchs BM, Amann RI, Teeling H. Dissolved storage glycans shaped the community composition of abundant bacterioplankton clades during a North Sea spring phytoplankton bloom. Microbiome. 2023 04 17; 11(1):77. PMID: 37069671; PMCID: PMC10108472.
      Citations: 6     Fields:    Translation:Cells
    10. Seah BKB, Singh M, Emmerich C, Singh A, Woehle C, Huettel B, Byerly A, Stover NA, Sugiura M, Harumoto T, Swart EC. MITE infestation accommodated by genome editing in the germline genome of the ciliate Blepharisma. Proc Natl Acad Sci U S A. 2023 Jan 24; 120(4):e2213985120. PMID: 36669106; PMCID: PMC9942856.
      Citations: 2     Fields:    Translation:HumansAnimalsCells
    11. Singh M, Seah BKB, Emmerich C, Singh A, Woehle C, Huettel B, Byerly A, Stover NA, Sugiura M, Harumoto T, Swart EC. Origins of genome-editing excisases as illuminated by the somatic genome of the ciliate Blepharisma. Proc Natl Acad Sci U S A. 2023 Jan 24; 120(4):e2213887120. PMID: 36669098; PMCID: PMC9942806.
      Citations: 1     Fields:    Translation:AnimalsCells
    12. Steiner T, Zachary M, Bauer S, M?ller MJ, Krischke M, Radziej S, Klepsch M, Huettel B, Eisenreich W, Rudel T, Beier D. Central Role of Sibling Small RNAs NgncR_162 and NgncR_163 in Main Metabolic Pathways of Neisseria gonorrhoeae. mBio. 2023 02 28; 14(1):e0309322. PMID: 36598194; PMCID: PMC9973317.
      Citations: 3     Fields:    Translation:HumansCells
    13. Erger F, Wenzel A, Thiele H, Tschernoster N, Becker JU, Huettel B, Beck B, Leenen E, Harth A, Lokhande S, Joerres A, Ekici A, Weidemann A, Altm?ller J. Alport syndrome and autosomal dominant tubulointerstitial kidney disease frequently underlie end-stage renal disease of unknown origin-a single-center analysis. Nephrol Dial Transplant. 2022 09 22; 37(10):1895-1905. PMID: 35485766.
      Citations: 1     Fields:    Translation:Humans
    14. Flood PJ, Nowrousian M, Huettel B, Woehle C, Becker K, Wollenweber TE, Begerow D, Grefen C. Draft genome of the aardaker (Lathyrus tuberosus L.), a tuberous legume. BMC Genom Data. 2022 09 04; 23(1):70. PMID: 36057561; PMCID: PMC9441078.
      Citations:    Fields:    Translation:Animals
    15. Gao H, Song W, Severing E, Vayssi?res A, Huettel B, Franzen R, Richter R, Chai J, Coupland G. PIF4 enhances DNA binding of CDF2 to co-regulate target gene expression and promote Arabidopsis hypocotyl cell elongation. Nat Plants. 2022 09; 8(9):1082-1093. PMID: 35970973; PMCID: PMC9477738.
      Citations: 5     Fields:    Translation:Animals
    16. Hofstatter PG, Thangavel G, Lux T, Neumann P, Vondrak T, Novak P, Zhang M, Costa L, Castellani M, Scott A, Toegelov? H, Fuchs J, Mata-Sucre Y, Dias Y, Vanzela ALL, Huettel B, Almeida CCS, ?imkov? H, Souza G, Pedrosa-Harand A, Macas J, Mayer KFX, Houben A, Marques A. Repeat-based holocentromeres influence genome architecture and karyotype evolution. Cell. 2022 Aug 18; 185(17):3153-3168.e18. PMID: 35926507.
      Citations: 22     Fields:    Translation:AnimalsCells
    17. Lian Q, Solier V, Walkemeier B, Durand S, Huettel B, Schneeberger K, Mercier R. The megabase-scale crossover landscape is largely independent of sequence divergence. Nat Commun. 2022 07 02; 13(1):3828. PMID: 35780220; PMCID: PMC9250513.
      Citations: 15     Fields:    Translation:AnimalsCells
    18. Stanzick KJ, Wenzel A, Seitz R, Stark KJ, Huettel B, Beck BB, Genomics England Research Consortium, Basic-Jukic N, Sayer JA, Ziegler C, Heid IM, Wopperer FJ, Knaup KX, Schneider K, Jobst-Schwan T, Ekici AB, Uebe S, Schliep S, Sch?rfeld C, Bernhardt W, G?del M, Wiesener A, Popp B, Gr?ne HJ, Friedrich B, Wei? M, Schiffer M, Schr?ppel B, B?ttner-Herold M, Amann K, Reis A, Pasutto F, Wiesener MS. Diverse molecular causes of unsolved autosomal dominant tubulointerstitial kidney diseases. Kidney Int. 2022 08; 102(2):405-420. PMID: 35643372.
      Citations: 3     Fields:    Translation:Humans
    19. Lv Y, Huettel B, Muyle AM, Seymour DK, Gaut BS. Gene Body Methylation in Plants: Mechanisms, Functions, and Important Implications for Understanding Evolutionary Processes. Genome Biol Evol. 2022 04 10; 14(4). PMID: 35298639; PMCID: PMC8995044.
      Citations: 16     Fields:    Translation:AnimalsCells
    20. Schouten HJ, van Rengs WMJ, Schmidt MH, Effgen S, Le DB, Wang Y, Zaidan MWAM, Huettel B, Usadel B, Underwood CJ. A chromosome scale tomato genome built from complementary PacBio and Nanopore sequences alone reveals extensive linkage drag during breeding. Plant J. 2022 04; 110(2):572-588. PMID: 35106855.
      Citations: 23     Fields:    Translation:AnimalsCells
    21. Sun H, Jiao WB, Krause K, Goel M, Folz-Donahue K, Kukat C, Huettel B, Schneeberger K, Campoy JA. Chromosome-scale and haplotype-resolved genome assembly of a tetraploid potato cultivar. Nat Genet. 2022 03; 54(3):342-348. PMID: 35241824; PMCID: PMC8920897.
      Citations: 47     Fields:    Translation:AnimalsCells
    22. Garighan J, Dvorak E, Estevan J, Loridon K, Huettel B, Sarah G, Farrera I, Leclercq J, Costes E, Grynberg P, Coiti Togawa R, Mota do Carmo Costa M, Andr?s F. The Identification of Small RNAs Differentially Expressed in Apple Buds Reveals a Potential Role of the Mir159-MYB Regulatory Module during Dormancy. Plants (Basel). 2021 Dec 03; 10(12). PMID: 34961136; PMCID: PMC8703471.
      Citations: 5     
    23. Costa L, Buddenhagen C, Thomas WW, Huettel B, Schubert V, Dodsworth S, Houben A, Souza G, Pedrosa-Harand A, Marques A. Aiming off the target: recycling target capture sequencing reads for investigating repetitive DNA. Ann Bot. 2021 11 09; 128(7):835-848. PMID: 34050647; PMCID: PMC8577205.
      Citations: 6     Fields:    
    24. Heyl F, Srikumar A, Prakash JSS, Backofen R, Owttrim GW, Migur A, Fuss J, Huettel B, Steglich C, Reinhardt R, Hess WR. The temperature-regulated DEAD-box RNA helicase CrhR interactome: Autoregulation and photosynthesis-related transcripts. J Exp Bot. 2021 Sep 09. PMID: 34499142.
      Citations: 4     Fields:    
    25. Skern-Mauritzen R, Furmanek T, Besnier F, Nuhn M, Dalvin S, Edvardsen RB, Klages S, Kersey P, Leong JS, Koop BF, Malde K, Eichner C, Dondrup M, Komisarczuk AZ, Huettel B, Stueber K, Grotmol S, Karlsbakk E, Glover KA, Reinhardt R, Lien S, Jonassen I, Nilsen F. The salmon louse genome: Copepod features and parasitic adaptations. Genomics. 2021 11; 113(6):3666-3680. PMID: 34403763.
      Citations: 10     Fields:    Translation:AnimalsCells
    26. Aecyo P, Huettel B, Silva A, Esposito T, Leal IR, Gagnon E, Souza G, Pedrosa-Harand A, Marques A, Ribeiro E. Plastome evolution in the Caesalpinia group (Leguminosae) and its application in phylogenomics and populations genetics. Planta. 2021 Jul 08; 254(2):27. PMID: 34236509.
      Citations: 7     Fields:    Translation:Animals
    27. Priest T, Orellana LH, Huettel B, Fuchs BM, Amann R. Microbial metagenome-assembled genomes of the Fram Strait from short and long read sequencing platforms. PeerJ. 2021; 9:e11721. PMID: 34249520; PMCID: PMC8254474.
      Citations: 6     Fields:    
    28. Greve C, Wolf M, Hiller M, Janke A, Schneider C, Woehle C, D'Haese CA, B?lint M, Huettel B. Two high-quality de novo genomes from single ethanol-preserved specimens of tiny metazoans (Collembola). Gigascience. 2021 05 21; 10(5). PMID: 34018554; PMCID: PMC8138834.
      Citations: 13     Fields:    Translation:Animals
    29. Plesken C, Pattar P, Reiss B, Noor ZN, Klug K, Huettel B, Hahn M, Zhang L. Genetic Diversity of Botrytis cinerea Revealed by Multilocus Sequencing, and Identification of B. cinerea Populations Showing Genetic Isolation and Distinct Host Adaptation. Front Plant Sci. 2021; 12:663027. PMID: 34025700; PMCID: PMC8131559.
      Citations: 9     
    30. Graf JS, Schorn S, Kitzinger K, Ahmerkamp S, Woehle C, Huettel B, Schubert CJ, Kuypers MMM, Milucka J. Anaerobic endosymbiont generates energy for ciliate host by denitrification. Nature. 2021 03; 591(7850):445-450. PMID: 33658719; PMCID: PMC7969357.
      Citations: 19     Fields:    Translation:AnimalsCells
    31. Folz-Donahue K, Rubio M, Kukat C, Ruiz D, Campoy JA, Sun H, Goel M, Jiao WB, Wang N, Liu C, Huettel B, Schneeberger K. Gamete binning: chromosome-level and haplotype-resolved genome assembly enabled by high-throughput single-cell sequencing of gamete genomes. Genome Biol. 2020 12 29; 21(1):306. PMID: 33372615; PMCID: PMC7771071.
      Citations: 26     Fields:    Translation:Cells
    32. Alam R, Septiningsih EM, Bailey-Serres J, Jagadish SVK, Schaarschmidt S, Fischer A, Lawas LMF, Huettel B, Hincha DK, Zuther E. Utilizing PacBio Iso-Seq for Novel Transcript and Gene Discovery of Abiotic Stress Responses in Oryza sativa L. Int J Mol Sci. 2020 Oct 31; 21(21). PMID: 33142722; PMCID: PMC7663775.
      Citations: 17     Fields:    Translation:AnimalsCells
    33. Huettel B, Kube M, Fern?ndez FD, Z?bert C, Conci LR. Draft Genome Sequence of "Candidatus Phytoplasma pruni" (X-Disease Group, Subgroup 16SrIII-B) Strain ChTDIII from Argentina. Microbiol Resour Announc. 2020 Sep 17; 9(38). PMID: 32943565; PMCID: PMC7498431.
      Citations: 2     
    34. Huettel B, Groma M, Horst SA, Das S, Klepsch M, Rudel T, Medina E, Fraunholz M. Identification of a Novel LysR-Type Transcriptional Regulator in Staphylococcus aureus That Is Crucial for Secondary Tissue Colonization during Metastatic Bloodstream Infection. mBio. 2020 08 25; 11(4). PMID: 32843554; PMCID: PMC7448277.
      Citations: 4     Fields:    Translation:AnimalsCells
    35. Frommer B, Huettel B, Weisshaar B, Holtgr?we D, Hausmann L, Vieh?ver P, T?pfer R. Genome Sequences of Both Organelles of the Grapevine Rootstock Cultivar 'B?rner'. Microbiol Resour Announc. 2020 Apr 09; 9(15). PMID: 32273371; PMCID: PMC7380517.
      Citations: 3     
    36. Chiba Y, Seo M, Andr?s F, Kinoshita A, Kalluri N, Fern?ndez V, Falavigna VS, Cruz TMD, Jang S, Mettler-Altmann T, Huettel B, Coupland G. The sugar transporter SWEET10 acts downstream of FLOWERING LOCUS T during floral transition of Arabidopsis thaliana. BMC Plant Biol. 2020 Feb 03; 20(1):53. PMID: 32013867; PMCID: PMC6998834.
      Citations: 26     Fields:    Translation:AnimalsCells
    37. Huettel B, Gagnon E, Leitch IJ, Lewis GP, Van-Lume B, Mata-Sucre Y, B?ez M, Ribeiro T, Pedrosa-Harand A, Souza G. Evolutionary convergence or homology? Comparative cytogenomics of Caesalpinia group species (Leguminosae) reveals diversification in the pericentromeric heterochromatic composition. Planta. 2019 Dec; 250(6):2173-2186. PMID: 31696317.
      Citations: 9     Fields:    Translation:AnimalsCells
    38. Lambrecht SJ, Kanesaki Y, Steglich C, Fuss J, Huettel B, Reinhardt R. Interplay and Targetome of the Two Conserved Cyanobacterial sRNAs Yfr1 and Yfr2 in Prochlorococcus MED4. Sci Rep. 2019 10 04; 9(1):14331. PMID: 31586076; PMCID: PMC6778093.
      Citations: 5     Fields:    Translation:Cells
    39. Rowan BA, Michelmore RW, Sun H, Flood PJ, Brandt R, Fuss J, Hancock AM, Huettel B, Schneeberger K. Linked-read sequencing of gametes allows efficient genome-wide analysis of meiotic recombination. Nat Commun. 2019 09 20; 10(1):4310. PMID: 31541084; PMCID: PMC6754367.
      Citations: 23     Fields:    Translation:AnimalsCells
    40. Seah BKB, Antony CP, Huettel B, Zarzycki J, Schada von Borzyskowski L, Erb TJ, Kouris A, Kleiner M, Liebeke M, Dubilier N, Gruber-Vodicka HR. Sulfur-Oxidizing Symbionts without Canonical Genes for Autotrophic CO2 Fixation. mBio. 2019 06 25; 10(3). PMID: 31239380; PMCID: PMC6593406.
      Citations: 11     Fields:    Translation:AnimalsCells
    41. Pucker B, Stadermann KB, Frey K, Huettel B, Reinhardt R, Weisshaar B, Holtgr?we D. A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set. PLoS One. 2019; 14(5):e0216233. PMID: 31112551; PMCID: PMC6529160.
      Citations: 22     Fields:    Translation:AnimalsCells
    42. Dantas LG, Alencar L, Huettel B, Pedrosa-Harand A. Development of ten microsatellite markers for Alibertia edulis (Rubiaceae), a Brazilian savanna tree species. Mol Biol Rep. 2019 Aug; 46(4):4593-4597. PMID: 31041674.
      Citations: 2     Fields:    Translation:AnimalsCells
    43. Braun M, Esposito T, Huettel B, Harand AP. Development and characterization of eleven microsatellite loci for the tropical understory tree Paypayrola blanchetiana Tul. (Violaceae). Mol Biol Rep. 2019 Apr; 46(2):2529-2532. PMID: 30689185.
      Citations: 1     Fields:    Translation:AnimalsCells
    44. Hou J, Shi X, Chen C, Islam MS, Johnson AF, Kanno T, Huettel B, Yen MR, Hsu FM, Ji T, Chen PY, Matzke M, Matzke AJM, Cheng J, Birchler JA. Global impacts of chromosomal imbalance on gene expression in Arabidopsis and other taxa. Proc Natl Acad Sci U S A. 2018 11 27; 115(48):E11321-E11330. PMID: 30429332; PMCID: PMC6275517.
      Citations: 29     Fields:    Translation:AnimalsCells
    45. Hagemann M, Scharnagl M, Bolay P, Lott SC, Hess WR, G?rtner K, Fuss J, Huettel B, Reinhardt R, Kl?hn S. Identification of the DNA methyltransferases establishing the methylome of the cyanobacterium Synechocystis sp. PCC 6803. DNA Res. 2018 Aug 01; 25(4):343-352. PMID: 29444255; PMCID: PMC6105098.
      Citations: 15     Fields:    Translation:Cells
    46. Kirioukhova O, Shah JN, Tayyab M, Mueller NE, Govind G, Federer M, Gheyselinck J, Barrell PJ, Ma H, Sprunck S, Huettel B, Wallace H, Grossniklaus U, Johnston AJ, Larsen DS, Baroux C. Aberrant imprinting may underlie evolution of parthenogenesis. Sci Rep. 2018 Jul 13; 8(1):10626. PMID: 30006526; PMCID: PMC6045609.
      Citations: 11     Fields:    Translation:AnimalsCells
    47. Li FW, Brouwer P, Carretero-Paulet L, Cheng S, de Vries J, Eily A, Kuo LY, Li Z, Simenc M, Small I, Wafula E, Angarita S, Barker MS, dePamphilis C, Hosmani PS, Huang YM, Huettel B, Kato Y, Liu X, Maere S, McDowell R, Mueller LA, Nierop KGJ, Rensing SA, Robison T, Rothfels CJ, Sigel EM, Song Y, Timilsena PR, Van de Peer Y, Wang H, Wilhelmsson PKI, Wolf PG, Xu X, Der JP, Schluepmann H, Wong GK, Pryer KM, Delaux PM, Koppers N, Br?utigam A, Gould S. Fern genomes elucidate land plant evolution and cyanobacterial symbioses. Nat Plants. 2018 07; 4(7):460-472. PMID: 29967517; PMCID: PMC6786969.
      Citations: 150     Fields:    Translation:AnimalsCells
    48. Firmer C, da Silva LV, Weising K, Zenk FL, W?hrmann T, Huettel B, Paggi GM. Development of 15 nuclear microsatellite markers in Deuterocohnia (Pitcairnioideae; Bromeliaceae) using 454 pyrosequencing. Appl Plant Sci. 2018 Apr; 6(4):e1147. PMID: 30131889; PMCID: PMC5947610.
      Citations: 1     
    49. Wenzel A, Altmueller J, Thiele H, Pannes A, Staubach S, Salido E, Nuernberg P, Rump P, Hanisch FG, Wolf MTF, Beck BB, Ekici AB, Popp B, Stueber K, Reinhardt R, Reis A, Wiesener M, Huettel B. Single molecule real time sequencing in ADTKD-MUC1 allows complete assembly of the VNTR and exact positioning of causative mutations. Sci Rep. 2018 03 08; 8(1):4170. PMID: 29520014; PMCID: PMC5843638.
      Citations: 16     Fields:    Translation:HumansCells
    50. Belkin N, Berman-Frank I, Hou S, L?pez-P?rez M, Pfreundt U, St?ber K, Huettel B, Reinhardt R, Rodriguez-Valera F, Hess WR. Benefit from decline: the primary transcriptome of Alteromonas macleodii str. Te101 during Trichodesmium demise. ISME J. 2018 04; 12(4):981-996. PMID: 29335641; PMCID: PMC5864184.
      Citations: 20     Fields:    Translation:Cells
    51. Dijkhuizen LW, Brouwer P, Bolhuis H, Reichart GJ, Huettel B, Bolger AM, Li FW, Cheng S, Liu X, Wong GK, Pryer K, Schluepmann H, Koppers N, Weber A, Br?utigam A. Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N2 but may denitrify. New Phytol. 2018 Jan; 217(1):453-466. PMID: 29084347; PMCID: PMC5901025.
      Citations: 12     Fields:    Translation:AnimalsCellsPHPublic Health
    52. Schiessl SV, Huettel B, Kuehn D, Reinhardt R, Snowdon RJ. Flowering Time Gene Variation in Brassica Species Shows Evolutionary Principles. Front Plant Sci. 2017; 8:1742. PMID: 29089948; PMCID: PMC5651034.
      Citations: 16     
    53. Seah BKB, Schwaha T, Volland JM, Huettel B, Dubilier N, Gruber-Vodicka HR. Specificity in diversity: single origin of a widespread ciliate-bacteria symbiosis. Proc Biol Sci. 2017 Jul 12; 284(1858). PMID: 28701560; PMCID: PMC5524500.
      Citations: 13     Fields:    Translation:AnimalsCells
    54. Schiessl S, Snowdon RJ, Huettel B, Kuehn D, Reinhardt R. Targeted deep sequencing of flowering regulators in Brassica napus reveals extensive copy number variation. Sci Data. 2017 03 14; 4:170013. PMID: 28291231; PMCID: PMC5349243.
      Citations: 18     Fields:    Translation:Animals
    55. Schiessl S, Snowdon R, Huettel B, Kuehn D, Reinhardt R. Post-polyploidisation morphotype diversification associates with gene copy number variation. Sci Rep. 2017 02 06; 7:41845. PMID: 28165502; PMCID: PMC5292959.
      Citations: 35     Fields:    Translation:Animals
    56. Jiao WB, Accinelli GG, Hartwig B, Kiefer C, Baker D, Severing E, Willing EM, Piednoel M, Woetzel S, Madrid-Herrero E, Huettel B, Reinhard R, Koch MA, Swan D, Clavijo B, Coupland G, Schneeberger K, H?mann U. Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data. Genome Res. 2017 05; 27(5):778-786. PMID: 28159771; PMCID: PMC5411772.
      Citations: 61     Fields:    Translation:AnimalsCells
    57. Huettel B, Reinhardt R, Bl?ttner S, Das S, Paprotka K, Eilers U, Krischke M, Kretschmer D, Remmele CW, Dittrich M, M?ller T, Schuelein-Voelk C, Hertlein T, Mueller MJ, Ohlsen K, Rudel T, Fraunholz MJ. Staphylococcus aureus Exploits a Non-ribosomal Cyclic Dipeptide to Modulate Survival within Epithelial Cells and Phagocytes. PLoS Pathog. 2016 09; 12(9):e1005857. PMID: 27632173; PMCID: PMC5025175.
      Citations: 27     Fields:    Translation:HumansAnimalsCells
    58. Cartolano M, Huettel B, Hartwig B, Reinhardt R, Schneeberger K. cDNA Library Enrichment of Full Length Transcripts for SMRT Long Read Sequencing. PLoS One. 2016; 11(6):e0157779. PMID: 27327613; PMCID: PMC4915659.
      Citations: 28     Fields:    Translation:Animals
    59. Forat S, Huettel B, Reinhardt R, Fimmers R, Haidl G, Denschlag D, Olek K. Correction: Methylation Markers for the Identification of Body Fluids and Tissues from Forensic Trace Evidence. PLoS One. 2016; 11(5):e0156472. PMID: 27219355; PMCID: PMC4878790.
      Citations:    Fields:    
    60. Huettel B, Reinhardt R, Fimmers R, Haidl G, Denschlag D, Forat S, Olek K. Methylation Markers for the Identification of Body Fluids and Tissues from Forensic Trace Evidence. PLoS One. 2016; 11(2):e0147973. PMID: 26829227; PMCID: PMC4734623.
      Citations: 21     Fields:    Translation:HumansCells
    61. Castro PH, Huettel B, Aarts MG, Azevedo H, Azinheiro SG, Mu?oz-M?rida A, Assun??o AG. Transcriptomic profiling of Arabidopsis gene expression in response to varying micronutrient zinc supply. Genom Data. 2016 Mar; 7:256-8. PMID: 26981422; PMCID: PMC4778672.
      Citations: 5     
    62. Wagner N, Weising K, W?hrmann T, Huettel B. Microsatellites from Fosterella christophii (Bromeliaceae) by de novo transcriptome sequencing on the Pacific Biosciences RS platform. Appl Plant Sci. 2016 Jan; 4(1). PMID: 26819858; PMCID: PMC4716777.
      Citations: 1     
    63. Sacharowski SP, Gratkowska DM, Sarnowska EA, Kondrak P, Jancewicz I, Bucior E, Rolicka AT, Kowalczyk J, Pawlikowska K, Jerzmanowski A, Sarnowski TJ, Porri A, Franzen R, Huettel B, Torti S, Schmelzer E, Coupland G, Koncz C. SWP73 Subunits of Arabidopsis SWI/SNF Chromatin Remodeling Complexes Play Distinct Roles in Leaf and Flower Development. Plant Cell. 2015 Jul; 27(7):1889-906. PMID: 26106148; PMCID: PMC4531355.
      Citations: 22     Fields:    Translation:AnimalsCells
    64. Moeller S, W?hrmann T, Huettel B, Weising K. Development of 18 polymorphic microsatellite markers for Vinca minor (Apocynaceae) via 454 pyrosequencing. Appl Plant Sci. 2015 May; 3(5). PMID: 25995978; PMCID: PMC4435468.
      Citations:    
    65. de Montaigu A, Takahashi Y, Ver Loren van Themaat E, Huettel B, Davis SJ, Coupland G, Fornara F, S?nchez-Villarreal A. The GI-CDF module of Arabidopsis affects freezing tolerance and growth as well as flowering. Plant J. 2015 Mar; 81(5):695-706. PMID: 25600594; PMCID: PMC5006856.
      Citations: 47     Fields:    Translation:AnimalsCells
    66. Siewert C, Hess WR, Duduk B, Huettel B, Reinhardt R, B?ttner C, Kube M. Complete genome determination and analysis of Acholeplasma oculi strain 19L, highlighting the loss of basic genetic features in the Acholeplasmataceae. BMC Genomics. 2014 Oct 24; 15:931. PMID: 25344468; PMCID: PMC4221730.
      Citations: 4     Fields:    Translation:Cells
    67. Benes V, Loehrer M, Vogel A, Huettel B, Reinhardt R, Duplessis S, Usadel B, Schaffrath U. On the current status of Phakopsora pachyrhizi genome sequencing. Front Plant Sci. 2014; 5:377. PMID: 25221558; PMCID: PMC4147182.
      Citations: 7     
    68. Kopf M, Huettel B, Reinhardt R, Hess WR, Kl?hn S, Voss B, St?ber K. Finished Genome Sequence of the Unicellular Cyanobacterium Synechocystis sp. Strain PCC 6714. Genome Announc. 2014 Jul 31; 2(4). PMID: 25081267; PMCID: PMC4118070.
      Citations: 8     
    69. Wijnker E, Velikkakam James G, Ding J, Becker F, Klasen JR, Rawat V, Rowan BA, de Snoo CB, Zapata L, Huettel B, de Jong H, Ossowski S, Weigel D, Koornneef M, Keurentjes JJ, Schneeberger K, de Jong DF. The genomic landscape of meiotic crossovers and gene conversions in Arabidopsis thaliana. Elife. 2013 Dec 17; 2:e01426. PMID: 24347547; PMCID: PMC3865688.
      Citations: 117     Fields:    Translation:Animals
    70. Urbany C, Benke A, Marsian J, Huettel B, Reinhardt R, Stich B. Ups and downs of a transcriptional landscape shape iron deficiency associated chlorosis of the maize inbreds B73 and Mo17. BMC Plant Biol. 2013 Dec 13; 13:213. PMID: 24330725; PMCID: PMC3881016.
      Citations: 6     Fields:    Translation:AnimalsCells
    71. Meharg C, Khan B, Norton G, Deacon C, Johnson D, Meharg AA, Reinhardt R, Huettel B. Trait-directed de novo population transcriptome dissects genetic regulation of a balanced polymorphism in phosphorus nutrition/arsenate tolerance in a wild grass, Holcus lanatus. New Phytol. 2014 Jan; 201(1):144-154. PMID: 24102375.
      Citations: 3     Fields:    Translation:AnimalsCells
    72. Mann AJ, Hahnke RL, Huang S, Werner J, Xing P, Barbeyron T, Huettel B, Reinhardt R, Harder J, Amann RI, Teeling H, St?ber K, Gl?ckner FO. The genome of the alga-associated marine flavobacterium Formosa agariphila KMM 3901T reveals a broad potential for degradation of algal polysaccharides. Appl Environ Microbiol. 2013 Nov; 79(21):6813-22. PMID: 23995932; PMCID: PMC3811500.
      Citations: 79     Fields:    Translation:AnimalsCells
    73. Krapp F, Benko-Iseppon AM, Huettel B, Weising K, W?hrmann T, Pinang? DS. A set of plastid microsatellite loci for the genus Dyckia (Bromeliaceae) derived from 454 pyrosequencing. Am J Bot. 2012 Dec; 99(12):e470-3. PMID: 23196399.
      Citations: 1     Fields:    Translation:AnimalsCells
    74. Bulgarelli D, Rott M, Schlaeppi K, Ver Loren van Themaat E, Ahmadinejad N, Assenza F, Rauf P, Huettel B, Reinhardt R, Schmelzer E, Peplies J, Gloeckner FO, Amann R, Eickhorst T, Schulze-Lefert P. Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota. Nature. 2012 Aug 02; 488(7409):91-5. PMID: 22859207.
      Citations: 735     Fields:    Translation:AnimalsCellsPHPublic Health
    75. Beutin L, Hammerl JA, Strauch E, Reetz J, Dieckmann R, Kelner-Burgos Y, Martin A, Miko A, Strockbine NA, Horn D, Monse H, Huettel B, Reinhardt R, Lindstedt BA, M?ller I, St?ber K. Spread of a distinct Stx2-encoding phage prototype among Escherichia coli O104:H4 strains from outbreaks in Germany, Norway, and Georgia. J Virol. 2012 Oct; 86(19):10444-55. PMID: 22811533; PMCID: PMC3457275.
      Citations: 21     Fields:    Translation:HumansCells
    76. Bus A, Hecht J, Huettel B, Reinhardt R, Stich B. High-throughput polymorphism detection and genotyping in Brassica napus using next-generation RAD sequencing. BMC Genomics. 2012 Jun 24; 13:281. PMID: 22726880; PMCID: PMC3442993.
      Citations: 65     Fields:    Translation:Animals
    77. Reimer JJ, Leuz I, Huettel B, Farrona S, Turck F, Engelhorn J, G?bel U. Development-related PcG target in the apex 4 controls leaf margin architecture in Arabidopsis thaliana. Development. 2012 Jul; 139(14):2566-75. PMID: 22675210.
      Citations: 15     Fields:    Translation:Animals
    78. Hajheidari M, Farrona S, Huettel B, Koncz Z, Koncz C. CDKF;1 and CDKD protein kinases regulate phosphorylation of serine residues in the C-terminal domain of Arabidopsis RNA polymerase II. Plant Cell. 2012 Apr; 24(4):1626-42. PMID: 22547781; PMCID: PMC3398568.
      Citations: 37     Fields:    Translation:AnimalsCells
    79. Frei dit Frey N, Mbengue M, Kwaaitaal M, Nitsch L, Altenbach D, Lozano-Duran R, Njo MF, Beeckman T, Huettel B, Borst JW, Panstruga R, Robatzek S, H?weker H. Plasma membrane calcium ATPases are important components of receptor-mediated signaling in plant immune responses and development. Plant Physiol. 2012 Jun; 159(2):798-809. PMID: 22535420; PMCID: PMC3375942.
      Citations: 42     Fields:    Translation:AnimalsCells
    80. Wagner N, Krapp F, Huettel B, Weising K, W?hrmann T. Development of microsatellite markers in Fosterella rusbyi (Bromeliaceae) using 454 pyrosequencing. Am J Bot. 2012 Apr; 99(4):e160-3. PMID: 22447987.
      Citations: 4     Fields:    Translation:AnimalsCells
    81. Herrero E, Lin YF, Huettel B, Talukdar S, Smaczniak C, Immink RG, van Eldik M, Fiers M, Schat H, Aarts MG, Assun??o AG. Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency. Proc Natl Acad Sci U S A. 2010 Jun 01; 107(22):10296-301. PMID: 20479230; PMCID: PMC2890486.
      Citations: 114     Fields:    Translation:HumansAnimalsCells
    82. Kanno T, Bucher E, Daxinger L, Huettel B, Kreil DP, Breinig F, Lind M, Schmitt MJ, Simon SA, Gurazada SG, Meyers BC, Lorkovic ZJ, Matzke AJ, Matzke M. RNA-directed DNA methylation and plant development require an IWR1-type transcription factor. EMBO Rep. 2010 Jan; 11(1):65-71. PMID: 20010803; PMCID: PMC2816620.
      Citations: 39     Fields:    Translation:AnimalsCells
    83. Matzke M, Kanno T, Daxinger L, Huettel B, Matzke AJ. RNA-mediated chromatin-based silencing in plants. Curr Opin Cell Biol. 2009 Jun; 21(3):367-76. PMID: 19243928.
      Citations: 259     Fields:    Translation:AnimalsCells
    84. Huettel B, Kreil DP, Matzke M, Matzke AJ. Effects of aneuploidy on genome structure, expression, and interphase organization in Arabidopsis thaliana. PLoS Genet. 2008 Oct; 4(10):e1000226. PMID: 18927630; PMCID: PMC2562519.
      Citations: 49     Fields:    Translation:AnimalsCells
    85. Kanno T, Bucher E, Daxinger L, Huettel B, Gregor W, Kreil DP, Matzke M, Matzke AJ, B?hmdorfer G. A structural-maintenance-of-chromosomes hinge domain-containing protein is required for RNA-directed DNA methylation. Nat Genet. 2008 May; 40(5):670-5. PMID: 18425128.
      Citations: 104     Fields:    Translation:AnimalsCells
    86. Matzke AJ, Huettel B, van der Winden J, Matzke M. Fluorescent transgenes to study interphase chromosomes in living plants. Methods Mol Biol. 2008; 463:241-65. PMID: 18951172.
      Citations: 5     Fields:    Translation:AnimalsCells
    87. Matzke M, Kanno T, Huettel B, Daxinger L, Matzke AJ. Targets of RNA-directed DNA methylation. Curr Opin Plant Biol. 2007 Oct; 10(5):512-9. PMID: 17702644.
      Citations: 94     Fields:    Translation:AnimalsCells
    88. Huettel B, Kanno T, Daxinger L, Bucher E, van der Winden J, Matzke AJ, Matzke M. RNA-directed DNA methylation mediated by DRD1 and Pol IVb: a versatile pathway for transcriptional gene silencing in plants. Biochim Biophys Acta. 2007 May-Jun; 1769(5-6):358-74. PMID: 17449119.
      Citations: 52     Fields:    Translation:AnimalsCells
    89. Huettel B, Kanno T, Daxinger L, Aufsatz W, Matzke AJ, Matzke M. Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis. EMBO J. 2006 Jun 21; 25(12):2828-36. PMID: 16724114; PMCID: PMC1500864.
      Citations: 129     Fields:    Translation:AnimalsCells
    90. Matzke M, Kanno T, Huettel B, Daxinger L, Matzke AJ. RNA-directed DNA methylation and Pol IVb in Arabidopsis. Cold Spring Harb Symp Quant Biol. 2006; 71:449-59. PMID: 17381327.
      Citations: 11     Fields:    Translation:HumansAnimalsCells
    91. Matzke AJ, Huettel B, van der Winden J, Matzke M. Use of two-color fluorescence-tagged transgenes to study interphase chromosomes in living plants. Plant Physiol. 2005 Dec; 139(4):1586-96. PMID: 16339805; PMCID: PMC1310544.
      Citations: 25     Fields:    Translation:AnimalsCells
    92. Kanno T, Huettel B, Mette MF, Aufsatz W, Jaligot E, Daxinger L, Kreil DP, Matzke M, Matzke AJ. Atypical RNA polymerase subunits required for RNA-directed DNA methylation. Nat Genet. 2005 Jul; 37(7):761-5. PMID: 15924141.
      Citations: 179     Fields:    Translation:AnimalsCells
    93. Winter P, Huettel B, Staginnus C, Muehlbauer FJ, Kahl G, Benko-Iseppon AM. Molecular markers closely linked to fusarium resistance genes in chickpea show significant alignments to pathogenesis-related genes located on Arabidopsis chromosomes 1 and 5. Theor Appl Genet. 2003 Jul; 107(2):379-86. PMID: 12709786.
      Citations: 10     Fields:    Translation:AnimalsCells

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